BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021A09SP1|AL427705
(888 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1163 1507 0.0
3x_Contig986 102 1e-21
>3x_Contig1163
Length = 3550
Score = 1507 bits (754), Expect = 0.0
Identities = 777/790 (98%), Gaps = 1/790 (0%)
Strand = Plus / Plus
Query: 98 gcttgacaaatccttcaacaagtttatcggaggtgacacagacattgatgagtcagamac 157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1 gcttgacaaatccttcaacaagtttatcggaggtgacacagacattgatgagtcagaaac 60
Query: 158 agcagcmattgaagacaaggtctttgagaagtttacaccaacttcttcgagaaacccatc 217
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agcagcaattgaagacaaggtctttgagaagtttacaccaacttcttcgagaaacccatc 120
Query: 218 catggcagayttatcacaagcagcatcctatttgactcctgcgttgaatcgctcacatat 277
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 catggcagatttatcacaagcagcatcctatttgactcctgcgttgaatcgctcacatat 180
Query: 278 caatcagctacagtccaataacagctcgctcattaaatcaactacgaaaatcctaccggc 337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caatcagctacagtccaataacagctcgctcattaaatcaactacgaaaatcctaccggc 240
Query: 338 ctcatcattacctagtagagaaactcattctaaatacggtccaccaccactacgtgatat 397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctcatcattacctagtagagaaactcattctaaatacggtccaccaccactacgtgatat 300
Query: 398 gaaacctcagtctaaaaytggggagctctatggcagccattctaatayagaacctttgaa 457
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 301 gaaacctcagtctaaaattggggagctctatggcagccattctaatatagaacctttgaa 360
Query: 458 ctccactgcatctgctcgtaacactgtacatccatcacactttgaagagcctgayaacta 517
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 361 ctccactgcatctgctcgtaacactgtacatccatcacactttgaagagcctgataacta 420
Query: 518 tgtcaatccctctggtgcaacctctctcggacaaaacgaactgccaaattccaactctac 577
||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 421 tgttaatccctctggtgcaacctctctcggacaaaaagaactgccaaattccaactctac 480
Query: 578 acctgaacctgtactgccacctttagctcaagtataccctggatatcaaatccatcacga 637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 acctgaacctgtactgccacctttagctcaagtataccctggatatcaaatccatcacga 540
Query: 638 tttatcagatggcaattcttcagtctcttctggccacagactctatagtaagatgggtgt 697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tttatcagatggcaattcttcagtctcttctggccacagactctatagtaagatgggtgt 600
Query: 698 gccaaaccaaaatactgcttcattctgcgttccttccccaatagtctctccacaatcaac 757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gccaaaccaaaatactgcttcattctgcgttccttccccaatagtctctccacaatcaac 660
Query: 758 gaagcatcaatcatctacttccaatmaggcactaccgttagamamtctmttcgatgatac 817
||||||||||||||||||||||||| |||||||||||||||| | ||| |||||||||||
Sbjct: 661 gaagcatcaatcatctacttccaataaggcactaccgttagaaaatctattcgatgatac 720
Query: 818 agtcacctcgggtttaaccactgaatctacccaaactggggagtaatgcgccacctcgtt 877
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 721 agtcacctcgggtttaaccactgaatctacccaaact-gggagtaatgcgccacctcgtt 779
Query: 878 tccatgaaaa 887
||||||||||
Sbjct: 780 tccatgaaaa 789
>3x_Contig986
Length = 3440
Score = 102 bits (51), Expect = 1e-21
Identities = 67/71 (94%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 1 tgaaaacattacgctatattgaagatttgagtaatcaactatcgtctagtaatgtaggct 60
|||||||||||||||||||||| |||||||||| ||| ||||||||||||||||| ||||
Sbjct: 3371 tgaaaacattacgctatattgacgatttgagtattca-ctatcgtctagtaatgtcggct 3429
Query: 61 ggttagggaag 71
|||||||||||
Sbjct: 3430 ggttagggaag 3440
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4470
Number of Sequences: 1807
Number of extensions: 4470
Number of successful extensions: 24
Number of sequences better than 1.0e-20: 2
length of query: 888
length of database: 10,358,551
effective HSP length: 16
effective length of query: 872
effective length of database: 10,329,639
effective search space: 9007445208
effective search space used: 9007445208
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)